参考URL
気分転換に思い出したようにやってみた。
結論は、macportsを2.4.1にバージョンアップしてから、インストールを実行したところ上手く行った…けど、代わりにgmtが上手くインストールされないという問題が。
ncl6.4.0は実行出来たので、とりあえずgmtの問題は置いておく。
macportsを2.4.1にバージョンアップして以降のログをそのまま残す（長くてごめんなさい
1.ncargのアップグレードをしてみる。
$ sudo port upgrade ncarg
Password:
---> Computing dependencies for wgrib2
---> Fetching archive for wgrib2
---> Attempting to fetch wgrib2-2.0.5_3.darwin_16.x86_64.tbz2 from https://packages.macports.org/wgrib2
---> Attempting to fetch wgrib2-2.0.5_3.darwin_16.x86_64.tbz2 from http://fco.it.packages.macports.org/mirrors/macports-packages/wgrib2
---> Attempting to fetch wgrib2-2.0.5_3.darwin_16.x86_64.tbz2 from http://her.gr.packages.macports.org/wgrib2
---> Fetching distfiles for wgrib2
---> Attempting to fetch wgrib2_nolib.tgz.v2.0.5 from ftp://ftp.cpc.ncep.noaa.gov/wd51we/wgrib2/
---> Attempting to fetch wgrib2_nolib.tgz.v2.0.5 from http://www.ftp.cpc.ncep.noaa.gov/wd51we/wgrib2/
---> Verifying checksums for wgrib2
---> Extracting wgrib2
---> Applying patches to wgrib2
---> Configuring wgrib2
---> Building wgrib2
---> Staging wgrib2 into destroot
---> Installing wgrib2 @2.0.5_3
---> Cleaning wgrib2
---> Computing dependencies for wgrib2
---> Deactivating wgrib2 @2.0.5_2
---> Cleaning wgrib2
---> Activating wgrib2 @2.0.5_3
---> Cleaning wgrib2
---> Computing dependencies for ncarg
---> Configuring ncarg
Error: ncarg cannot be built while another version of ncarg is active.
Error: Please forcibly deactivate the existing copy of ncarg, e.g. by running:
Error:
Error: sudo port -f deactivate ncarg ←これを実行しろと言われた気がした
Error:
Error: Then try again.
Error: Failed to configure ncarg: ncarg is active
Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_ncarg/ncarg/main.log for details.
Error: Follow https://guide.macports.org/#project.tickets to report a bug.
エラーがたくさん出たので、言うことを聞いてみる。
2.既にインストールされているncarg…つまり6.3.0…をdeactiveする。
$ sudo port -f deactivate ncarg
---> Unable to deactivate ncarg @6.3.0_9+gcc5, the following ports depend on it:
---> py27-nio @1.3.0b1_7+gcc6
Warning: Deactivate forced. Proceeding despite dependencies.
---> Deactivating ncarg @6.3.0_9+gcc5
---> Cleaning ncarg
3.nacrgのアップグレードを再実行する。
$ sudo port upgrade ncarg
---> Computing dependencies for ncarg
---> Configuring ncarg
Warning: reinplace s| -lquadmath|| didn't change anything in /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_ncarg/ncarg/work/ncl_ncarg-6.4.0/config/Darwin
Warning: reinplace s|g++$|/usr/bin/clang++| didn't change anything in /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_ncarg/ncarg/work/ncl_ncarg-6.4.0/config/Darwin
Warning: reinplace s|-D__UNIXOS2__|-D__UNIXOS2__ -D__JIRA1530__| didn't change anything in /opt/local/var/macports/build/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_ncarg/ncarg/work/ncl_ncarg-6.4.0/config/Darwin
---> Building ncarg
---> Staging ncarg into destroot
---> Installing ncarg @6.4.0_2+gcc5
---> Cleaning ncarg
---> Computing dependencies for ncarg
---> Activating ncarg @6.4.0_2+gcc5
---> Cleaning ncarg
---> Updating database of binaries
---> Scanning binaries for linking errors
---> Found 64 broken files, matching files to ports
---> Found 5 broken ports, determining rebuild order
You can always run 'port rev-upgrade' again to fix errors.
The following ports will be rebuilt:
py27-nio @1.3.0b1+gcc6
py27-h5py @2.6.0
grib_api @1.19.0+gcc5
gmt5 @5.2.1+gdal+nonfree+pcre
ncview @2.1.1
Continue? [Y/n]: Y ←Yを入力した
---> Computing dependencies for py27-numpy
---> Fetching archive for py27-numpy
---> Attempting to fetch py27-numpy-1.13.0_0+gfortran.darwin_16.x86_64.tbz2 from https://packages.macports.org/py27-numpy
---> Attempting to fetch py27-numpy-1.13.0_0+gfortran.darwin_16.x86_64.tbz2.rmd160 from https://packages.macports.org/py27-numpy
---> Installing py27-numpy @1.13.0_0+gfortran
---> Cleaning py27-numpy
---> Computing dependencies for py27-numpy
---> Deactivating py27-numpy @1.12.1_0+gfortran
---> Cleaning py27-numpy
---> Activating py27-numpy @1.13.0_0+gfortran
---> Cleaning py27-numpy
---> Computing dependencies for py27-nio
---> Fetching archive for py27-nio
---> Attempting to fetch py27-nio-1.3.0b1_8+gcc6.darwin_16.x86_64.tbz2 from https://packages.macports.org/py27-nio
---> Attempting to fetch py27-nio-1.3.0b1_8+gcc6.darwin_16.x86_64.tbz2 from http://fco.it.packages.macports.org/mirrors/macports-packages/py27-nio
---> Attempting to fetch py27-nio-1.3.0b1_8+gcc6.darwin_16.x86_64.tbz2 from http://her.gr.packages.macports.org/py27-nio
---> Fetching distfiles for py27-nio
---> Attempting to fetch PyNIO-1.3.0b1.tar.gz from https://www.earthsystemgrid.org/download/fileDownload.htm?logicalFileId=e328ec94-306e-11df-8e89-00c0f03d5b7c&dummy=
---> Attempting to fetch PyNIO-1.3.0b1.tar.gz from https://distfiles.macports.org/py-nio
---> Verifying checksums for py27-nio
---> Extracting py27-nio
---> Configuring py27-nio
---> Building py27-nio
---> Staging py27-nio into destroot
---> Installing py27-nio @1.3.0b1_8+gcc6
---> Cleaning py27-nio
---> Computing dependencies for py27-nio
---> Deactivating py27-nio @1.3.0b1_7+gcc6
---> Cleaning py27-nio
---> Activating py27-nio @1.3.0b1_8+gcc6
---> Cleaning py27-nio
---> Computing dependencies for py27-h5py
---> Fetching archive for py27-h5py
---> Attempting to fetch py27-h5py-2.7.0_1.darwin_16.x86_64.tbz2 from https://packages.macports.org/py27-h5py
---> Attempting to fetch py27-h5py-2.7.0_1.darwin_16.x86_64.tbz2.rmd160 from https://packages.macports.org/py27-h5py
---> Installing py27-h5py @2.7.0_1
---> Cleaning py27-h5py
---> Computing dependencies for py27-h5py
---> Deactivating py27-h5py @2.6.0_0
---> Cleaning py27-h5py
---> Activating py27-h5py @2.7.0_1
---> Cleaning py27-h5py
---> Computing dependencies for grib_api
---> Fetching archive for grib_api
---> Attempting to fetch grib_api-1.19.0_2+gcc5.darwin_16.x86_64.tbz2 from https://packages.macports.org/grib_api
---> Attempting to fetch grib_api-1.19.0_2+gcc5.darwin_16.x86_64.tbz2 from http://fco.it.packages.macports.org/mirrors/macports-packages/grib_api
---> Attempting to fetch grib_api-1.19.0_2+gcc5.darwin_16.x86_64.tbz2 from http://her.gr.packages.macports.org/grib_api
---> Fetching distfiles for grib_api
---> Attempting to fetch grib_api-1.19.0-Source.tar.gz from https://software.ecmwf.int/wiki/download/attachments/3473437
---> Verifying checksums for grib_api
---> Extracting grib_api
---> Applying patches to grib_api
---> Configuring grib_api
---> Building grib_api
---> Staging grib_api into destroot
---> Installing grib_api @1.19.0_2+gcc5
---> Cleaning grib_api
---> Computing dependencies for grib_api
---> Deactivating grib_api @1.19.0_1+gcc5
---> Cleaning grib_api
---> Activating grib_api @1.19.0_2+gcc5
---> Cleaning grib_api
---> Computing dependencies for gmt5
---> Fetching distfiles for gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://ftp.soest.hawaii.edu/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://ibis.grdl.noaa.gov/pub/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://ftp.iris.washington.edu/pub/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://ftp.iag.usp.br/pub/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://ftp.geologi.uio.no/pub/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://gd.tuwien.ac.at/pub/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://ftp.scc.u-tokai.ac.jp/pub/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from ftp://gmt.mirror.ac.za/pub/gmt
---> Attempting to fetch gmt-5.4.1-src.tar.xz from https://distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://aarnet.au.distfiles.macports.org/pub/macports/distfiles/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://cjj.kr.distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://fco.it.distfiles.macports.org/mirrors/macports-distfiles/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://her.gr.distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://jnb.za.distfiles.macports.org/distfiles/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://jog.id.distfiles.macports.org/macports/distfiles/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://kmq.jp.distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://lil.fr.distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://mse.uk.distfiles.macports.org/sites/distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://nou.nc.distfiles.macports.org/pub/macports/distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://nue.de.distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://osl.no.distfiles.macports.org/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from https://pek.cn.distfiles.macports.org/macports/distfiles/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://sea.us.distfiles.macports.org/macports/distfiles/gmt5
---> Attempting to fetch gmt-5.4.1-src.tar.xz from http://ykf.ca.distfiles.macports.org/MacPorts/mpdistfiles/gmt5
Error: Failed to fetch gmt5: The requested URL returned error: 404 Not Found
Error: See /opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_science_gmt5/gmt5/main.log for details.
Error: rev-upgrade failed: Error rebuilding gmt5
Error: Follow https://guide.macports.org/#project.tickets to report a bug.
gmtのエラーはたくさん出たのだけど、一旦nclを実行してみる。
$ ncl
Copyright (C) 1995-2017 - All Rights Reserved
University Corporation for Atmospheric Research
NCAR Command Language Version 6.4.0
The use of this software is governed by a License Agreement.
See http://www.ncl.ucar.edu/ for more details.
ncl 0>
とりあえず出来た。今日のところはこのくらいにしておくか。
